Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm23949-201ENSMUST00000104027 127 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm9899-201ENSMUST00000065519 555 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nkd1Q99MH6 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Btrc-209ENSMUST00000224478 2194 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm22323-201ENSMUST00000103832 109 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Mir1938-201ENSMUST00000158746 100 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm37259-201ENSMUST00000193903 849 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm45575-201ENSMUST00000210283 548 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nkd1Q99MH6 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms