Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm12463-201ENSMUST00000118271 849 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm14109-201ENSMUST00000118814 309 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm11222-201ENSMUST00000119005 738 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Mir8093-201ENSMUST00000185043 137 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm15198-201ENSMUST00000117283 177 ntBASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cttnbp2nlQ99LJ0 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms