Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gm45113-201ENSMUST00000207518 165 ntBASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gm45856-201ENSMUST00000212752 416 ntBASIC10.05□□□□□ -0.8
Thumpd1Q99J36 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Thumpd1Q99J36 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm13296-201ENSMUST00000117854 997 ntBASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm5745-201ENSMUST00000183748 313 ntBASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm21769-201ENSMUST00000211922 111 ntBASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm18935-201ENSMUST00000212692 664 ntBASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Thumpd1Q99J36 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Thumpd1Q99J36 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms