Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.33□□□□□ -0.28
Col20a1Q923P0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
Col20a1Q923P0 Gm44814-201ENSMUST00000207018 434 ntBASIC13.33□□□□□ -0.28
Col20a1Q923P0 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.33□□□□□ -0.28
Col20a1Q923P0 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col20a1Q923P0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col20a1Q923P0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col20a1Q923P0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col20a1Q923P0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col20a1Q923P0 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.33□□□□□ -0.28
Col20a1Q923P0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col20a1Q923P0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.32□□□□□ -0.28
Col20a1Q923P0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Snord23-201ENSMUST00000116828 109 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm13600-201ENSMUST00000117949 744 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm13022-201ENSMUST00000121181 285 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm3828-201ENSMUST00000121817 257 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm16165-201ENSMUST00000160140 795 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Gm8255-201ENSMUST00000218693 305 ntBASIC13.32□□□□□ -0.28
Col20a1Q923P0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col20a1Q923P0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col20a1Q923P0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm12663-201ENSMUST00000118481 958 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm12986-201ENSMUST00000119037 967 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm14497-201ENSMUST00000119537 580 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm25830-201ENSMUST00000158923 132 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Snord55-201ENSMUST00000174939 79 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm24809-201ENSMUST00000175318 271 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm26976-201ENSMUST00000182929 908 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm42660-201ENSMUST00000197733 947 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm43912-201ENSMUST00000204352 538 ntBASIC13.31□□□□□ -0.28
Col20a1Q923P0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col20a1Q923P0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms