Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm27023-201ENSMUST00000182372 285 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm4034-201ENSMUST00000187674 480 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm44405-201ENSMUST00000198952 126 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Cog3-203ENSMUST00000227473 4197 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Mir877-201ENSMUST00000104738 85 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm17711-201ENSMUST00000172028 237 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 AC153936.1-201ENSMUST00000219874 395 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms