Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.18□□□□□ -0.46
TraipQ8VIG6 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.18□□□□□ -0.46
TraipQ8VIG6 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.18□□□□□ -0.46
TraipQ8VIG6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.18□□□□□ -0.46
TraipQ8VIG6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TraipQ8VIG6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.17□□□□□ -0.46
TraipQ8VIG6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm13284-201ENSMUST00000121020 547 ntBASIC12.17□□□□□ -0.46
TraipQ8VIG6 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm26238-201ENSMUST00000175538 117 ntBASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.17□□□□□ -0.46
TraipQ8VIG6 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm44323-201ENSMUST00000198689 129 ntBASIC12.17□□□□□ -0.46
TraipQ8VIG6 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Matn2-203ENSMUST00000226766 3252 ntBASIC12.17□□□□□ -0.46
TraipQ8VIG6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TraipQ8VIG6 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm14807-201ENSMUST00000116640 983 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm24248-201ENSMUST00000157321 322 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm28833-201ENSMUST00000189671 559 ntBASIC12.16□□□□□ -0.46
TraipQ8VIG6 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.16□□□□□ -0.46
TraipQ8VIG6 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms