Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm13505-201ENSMUST00000121666 817 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm6939-201ENSMUST00000122029 864 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm16441-201ENSMUST00000138176 924 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm28671-201ENSMUST00000187036 692 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm38349-201ENSMUST00000195732 462 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm37102-201ENSMUST00000195740 1105 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm5040-201ENSMUST00000218609 800 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm8730-201ENSMUST00000076373 954 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx54Q8K4L0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm15617-201ENSMUST00000118973 771 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm26943-201ENSMUST00000182295 957 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm32390-201ENSMUST00000212713 1172 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm18164-201ENSMUST00000213769 927 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm18166-201ENSMUST00000215557 927 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 CT025618.1-203ENSMUST00000227008 589 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx54Q8K4L0 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm8873-201ENSMUST00000217847 1439 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm16288-201ENSMUST00000137940 367 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm44498-201ENSMUST00000199509 111 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm9619-201ENSMUST00000211587 762 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gm4778-201ENSMUST00000098878 1098 ntBASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx54Q8K4L0 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms