Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim68Q8K243 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm15610-201ENSMUST00000120584 195 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim68Q8K243 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm5706-201ENSMUST00000181525 993 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.32□□□□□ -0.44
Trim68Q8K243 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim68Q8K243 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim68Q8K243 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Mir671-201ENSMUST00000102432 98 ntBASIC12.31□□□□□ -0.44
Trim68Q8K243 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Gm11619-201ENSMUST00000117474 237 ntBASIC12.31□□□□□ -0.44
Trim68Q8K243 Gm14270-201ENSMUST00000118388 846 ntBASIC12.31□□□□□ -0.44
Trim68Q8K243 Gm15003-201ENSMUST00000118884 446 ntBASIC12.31□□□□□ -0.44
Trim68Q8K243 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
Trim68Q8K243 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.31□□□□□ -0.44
Trim68Q8K243 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim68Q8K243 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim68Q8K243 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim68Q8K243 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim68Q8K243 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim68Q8K243 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim68Q8K243 Gm14892-201ENSMUST00000117636 267 ntBASIC12.3□□□□□ -0.44
Trim68Q8K243 Gm15615-201ENSMUST00000118876 198 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms