Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm15617-201ENSMUST00000118973 771 ntBASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm14381-201ENSMUST00000122105 414 ntBASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm26361-201ENSMUST00000158868 186 ntBASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm28071-201ENSMUST00000190355 478 ntBASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc28aQ8CEI3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm23596-201ENSMUST00000104304 132 ntBASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm20482-202ENSMUST00000174729 825 ntBASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm37597-201ENSMUST00000191853 382 ntBASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.87□□□□□ -0.51
Ccdc28aQ8CEI3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Olfml3-204ENSMUST00000169286 874 ntBASIC11.86□□□□□ -0.51
Ccdc28aQ8CEI3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms