Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm13426-201ENSMUST00000117887 795 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm14639-201ENSMUST00000120850 866 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm14148-201ENSMUST00000122433 1008 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm4868-201ENSMUST00000164138 789 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm5244-201ENSMUST00000164001 339 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Gm43097-201ENSMUST00000196867 151 ntBASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Col16a1Q8BLX7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm15373-201ENSMUST00000121495 214 ntBASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm16441-201ENSMUST00000138176 924 ntBASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm6038-201ENSMUST00000154310 948 ntBASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm9409-201ENSMUST00000197017 316 ntBASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.55□□□□□ -0.08
Col16a1Q8BLX7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm12345-201ENSMUST00000119288 898 ntBASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm5302-201ENSMUST00000202130 796 ntBASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col16a1Q8BLX7 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms