Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm14193-201ENSMUST00000105067 153 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm8731-201ENSMUST00000118088 412 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm15352-201ENSMUST00000118696 270 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm11956-201ENSMUST00000119525 512 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm14585-201ENSMUST00000120713 634 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm11246-201ENSMUST00000120880 345 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm7150-201ENSMUST00000122032 981 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm8365-201ENSMUST00000197334 648 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Depdc1bQ8BH88 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Depdc1bQ8BH88 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gm10807-201ENSMUST00000177134 795 ntBASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gm9540-201ENSMUST00000188230 478 ntBASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gm6108-201ENSMUST00000208365 367 ntBASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Depdc1bQ8BH88 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Gm15782-201ENSMUST00000121073 445 ntBASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.26□□□□□ -0.45
Depdc1bQ8BH88 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms