Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm42751-201ENSMUST00000198065 559 ntBASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Gm4978-201ENSMUST00000071565 801 ntBASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc85bQ6PDY0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Gm4775-201ENSMUST00000169588 402 ntBASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Mir6359-201ENSMUST00000183668 81 ntBASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc85bQ6PDY0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc85bQ6PDY0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm8152-201ENSMUST00000120842 637 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm23958-201ENSMUST00000157207 105 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm25394-201ENSMUST00000157338 133 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm23694-201ENSMUST00000179335 110 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm18552-201ENSMUST00000187425 538 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm37284-201ENSMUST00000193607 539 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm31274-201ENSMUST00000197356 229 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm43726-201ENSMUST00000199110 775 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc85bQ6PDY0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms