Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm3828-201ENSMUST00000121817 257 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm37009-201ENSMUST00000193297 361 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm42689-201ENSMUST00000202403 404 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm37582-201ENSMUST00000192953 1409 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm5308-201ENSMUST00000196752 1354 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm23555-201ENSMUST00000157815 135 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm18065-201ENSMUST00000221395 526 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Gm5194-201ENSMUST00000221457 742 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 AC137871.1-201ENSMUST00000228278 475 ntBASIC8.61□□□□□ -1.03
NipblQ6KCD5 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
NipblQ6KCD5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Zfp125-201ENSMUST00000079237 2488 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm20495-201ENSMUST00000173902 235 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm45090-201ENSMUST00000208775 1148 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 AC107752.1-201ENSMUST00000219362 469 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm9544-201ENSMUST00000223349 2482 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Gm43365-201ENSMUST00000196522 2106 ntBASIC8.6□□□□□ -1.03
NipblQ6KCD5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
NipblQ6KCD5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms