Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm7781-201ENSMUST00000117258 788 ntBASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 AC165260.2-201ENSMUST00000225371 395 ntBASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarca2Q6DIC0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Gm7642-201ENSMUST00000216345 1809 ntBASIC19.33■□□□□ 0.68
Smarca2Q6DIC0 Fam220-ps-201ENSMUST00000116535 783 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm15476-201ENSMUST00000118247 1191 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm13688-201ENSMUST00000121557 608 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm26208-201ENSMUST00000158677 124 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm36980-201ENSMUST00000195643 622 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Klf10-203ENSMUST00000227920 2144 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm37931-201ENSMUST00000194686 2866 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm38577-201ENSMUST00000221531 4545 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Mir705-201ENSMUST00000102058 82 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm42803-201ENSMUST00000201051 451 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Gm45893-201ENSMUST00000211899 247 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC19.32■□□□□ 0.68
Smarca2Q6DIC0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Snora68-201ENSMUST00000104375 131 ntBASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Gm6517-201ENSMUST00000121056 511 ntBASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Gm25154-201ENSMUST00000157123 119 ntBASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Gm22994-201ENSMUST00000175422 82 ntBASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Gm42908-201ENSMUST00000197508 870 ntBASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 AC139155.1-201ENSMUST00000226043 444 ntBASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca2Q6DIC0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Gm12377-201ENSMUST00000118656 252 ntBASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Gm14650-201ENSMUST00000120400 889 ntBASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 AC163646.3-202ENSMUST00000228685 691 ntBASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca2Q6DIC0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms