Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm11509-201ENSMUST00000117358 325 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox17Q61473 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Olfr284-202ENSMUST00000206647 966 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Gm45113-201ENSMUST00000207518 165 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.53□□□□□ -0.72
Sox17Q61473 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sox17Q61473 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sox17Q61473 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.53□□□□□ -0.72
Sox17Q61473 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox17Q61473 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.53□□□□□ -0.72
Sox17Q61473 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox17Q61473 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.53□□□□□ -0.72
Sox17Q61473 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Sox17Q61473 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox17Q61473 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox17Q61473 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Sox17Q61473 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox17Q61473 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Sox17Q61473 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox17Q61473 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Sox17Q61473 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sox17Q61473 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Sox17Q61473 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Rims2-204ENSMUST00000226410 3685 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Sox17Q61473 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.52□□□□□ -0.73
Sox17Q61473 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sox17Q61473 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sox17Q61473 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sox17Q61473 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms