Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.79□□□□□ -0.68
Nr1h4Q60641 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nr1h4Q60641 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm12742-201ENSMUST00000117326 410 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm5616-201ENSMUST00000165252 384 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm8741-201ENSMUST00000174736 384 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.78□□□□□ -0.68
Nr1h4Q60641 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Nr1h4Q60641 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.77□□□□□ -0.68
Nr1h4Q60641 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nr1h4Q60641 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm11783-201ENSMUST00000119549 885 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm5745-201ENSMUST00000183748 313 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm4857-201ENSMUST00000192718 785 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 AY036118-201ENSMUST00000200021 923 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.77□□□□□ -0.69
Nr1h4Q60641 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nr1h4Q60641 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms