Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm14538-201ENSMUST00000122019 1327 ntBASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gm28653-202ENSMUST00000227082 521 ntBASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Vps13aQ5H8C4 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm24597-201ENSMUST00000122503 300 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm42467-201ENSMUST00000202954 1447 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm27383-201ENSMUST00000184418 361 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm28391-201ENSMUST00000185202 379 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm18443-201ENSMUST00000185358 556 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm29528-201ENSMUST00000186699 379 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm29526-201ENSMUST00000187217 379 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm14111-201ENSMUST00000119851 999 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Gm8055-201ENSMUST00000099956 1008 ntBASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Vps13aQ5H8C4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm15727-201ENSMUST00000122416 437 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm26532-201ENSMUST00000180630 690 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm9353-201ENSMUST00000200472 604 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm3198-201ENSMUST00000208725 1026 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm18065-201ENSMUST00000221395 526 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Vps13aQ5H8C4 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms