Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm14633-201ENSMUST00000121152 470 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Mir1893-201ENSMUST00000122565 83 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Platr10-202ENSMUST00000191479 818 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm38349-201ENSMUST00000195732 462 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm3527-201ENSMUST00000198905 460 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm44540-201ENSMUST00000205640 354 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm18256-201ENSMUST00000209087 907 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Mir341-201ENSMUST00000093593 96 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm6304-201ENSMUST00000096579 447 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm8618-201ENSMUST00000097570 432 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.28□□□□□ -0.28
Col5a2Q3U962 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col5a2Q3U962 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.27□□□□□ -0.28
Col5a2Q3U962 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.27□□□□□ -0.28
Col5a2Q3U962 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm13777-201ENSMUST00000118208 345 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm9574-201ENSMUST00000173127 845 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm27833-201ENSMUST00000184285 124 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm43117-201ENSMUST00000198531 379 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 AC133496.1-201ENSMUST00000223891 743 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col5a2Q3U962 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.27□□□□□ -0.29
Col5a2Q3U962 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms