Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Mir1895-201ENSMUST00000122615 79 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm27494-201ENSMUST00000184735 189 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Drosha-207ENSMUST00000169061 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm23912-201ENSMUST00000104687 87 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm11801-201ENSMUST00000117807 746 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm11524-201ENSMUST00000119349 807 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm15376-201ENSMUST00000122258 783 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm24158-201ENSMUST00000175263 71 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm3436-201ENSMUST00000179930 840 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm44178-201ENSMUST00000205229 2930 ntBASIC9.22□□□□□ -0.93
Trim63Q38HM4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trim63Q38HM4 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms