Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.22□□□□□ -0.45
Col9a2Q07643 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col9a2Q07643 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col9a2Q07643 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm25053-201ENSMUST00000103982 133 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm25922-201ENSMUST00000104281 130 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm12389-201ENSMUST00000117696 418 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm13351-201ENSMUST00000118087 414 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm24679-201ENSMUST00000158762 111 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm24328-201ENSMUST00000175104 67 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm25053-202ENSMUST00000199731 132 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm18463-201ENSMUST00000207258 474 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm18460-201ENSMUST00000208088 464 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Capsl-202ENSMUST00000226688 739 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.21□□□□□ -0.45
Col9a2Q07643 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col9a2Q07643 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col9a2Q07643 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col9a2Q07643 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.21□□□□□ -0.46
Col9a2Q07643 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm18201-201ENSMUST00000174735 875 ntBASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm24809-201ENSMUST00000175318 271 ntBASIC12.2□□□□□ -0.46
Col9a2Q07643 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Col9a2Q07643 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.2□□□□□ -0.46
Col9a2Q07643 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Gm9111-201ENSMUST00000219394 709 ntBASIC12.2□□□□□ -0.46
Col9a2Q07643 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col9a2Q07643 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col9a2Q07643 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms