Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gm26272-201ENSMUST00000179241 132 ntBASIC14.05□□□□□ -0.16
Col1a2Q01149 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Gm33080-201ENSMUST00000205429 172 ntBASIC14.05□□□□□ -0.16
Col1a2Q01149 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.05□□□□□ -0.16
Col1a2Q01149 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.05□□□□□ -0.16
Col1a2Q01149 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.05□□□□□ -0.16
Col1a2Q01149 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.05□□□□□ -0.16
Col1a2Q01149 AC134793.1-202ENSMUST00000227444 803 ntBASIC14.05□□□□□ -0.16
Col1a2Q01149 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col1a2Q01149 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col1a2Q01149 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col1a2Q01149 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.05□□□□□ -0.16
Col1a2Q01149 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm12453-201ENSMUST00000121981 331 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm13981-201ENSMUST00000122360 447 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm43506-201ENSMUST00000200675 753 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm18204-201ENSMUST00000209835 793 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col1a2Q01149 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col1a2Q01149 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col1a2Q01149 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.04□□□□□ -0.16
Col1a2Q01149 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col1a2Q01149 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col1a2Q01149 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col1a2Q01149 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col1a2Q01149 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm23647-201ENSMUST00000175042 109 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 Rn5s-201ENSMUST00000177555 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm22109-201ENSMUST00000177995 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm22291-201ENSMUST00000178027 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm23284-201ENSMUST00000178069 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.03□□□□□ -0.16
Col1a2Q01149 Gm25018-201ENSMUST00000179081 119 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms