Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm7150-201ENSMUST00000122032 981 ntBASIC10.69□□□□□ -0.7
Apoa1Q00623 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Apoa1Q00623 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm6334-201ENSMUST00000207083 228 ntBASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm45113-201ENSMUST00000207518 165 ntBASIC10.69□□□□□ -0.7
Apoa1Q00623 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Apoa1Q00623 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.69□□□□□ -0.7
Apoa1Q00623 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Apoa1Q00623 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Apoa1Q00623 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm11783-201ENSMUST00000119549 885 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm20495-201ENSMUST00000173902 235 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm5745-201ENSMUST00000183748 313 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 AA914427-201ENSMUST00000193194 1166 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 AY036118-201ENSMUST00000200021 923 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Apoa1Q00623 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm4978-201ENSMUST00000071565 801 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm10478-201ENSMUST00000084451 396 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.68□□□□□ -0.7
Apoa1Q00623 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Apoa1Q00623 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Apoa1Q00623 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Apoa1Q00623 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Apoa1Q00623 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Apoa1Q00623 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Apoa1Q00623 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms