Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Smn1P97801 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Smn1P97801 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Smn1P97801 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Smn1P97801 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smn1P97801 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.65□□□□□ -0.86
Smn1P97801 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 AA474408-201ENSMUST00000098110 3339 ntBASIC9.65□□□□□ -0.86
Smn1P97801 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Smn1P97801 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.65□□□□□ -0.86
Smn1P97801 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.65□□□□□ -0.86
Smn1P97801 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.65□□□□□ -0.86
Smn1P97801 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.65□□□□□ -0.86
Smn1P97801 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Gm27501-201ENSMUST00000183599 107 ntBASIC9.65□□□□□ -0.86
Smn1P97801 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.65□□□□□ -0.86
Smn1P97801 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.65□□□□□ -0.86
Smn1P97801 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.65□□□□□ -0.86
Smn1P97801 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.65□□□□□ -0.86
Smn1P97801 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.65□□□□□ -0.86
Smn1P97801 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Smn1P97801 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smn1P97801 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Smn1P97801 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Smn1P97801 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.65□□□□□ -0.87
Smn1P97801 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smn1P97801 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Smn1P97801 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smn1P97801 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smn1P97801 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Smn1P97801 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.87
Smn1P97801 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Smn1P97801 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Smn1P97801 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Smn1P97801 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.64□□□□□ -0.87
Smn1P97801 Gm12957-201ENSMUST00000117835 377 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm15207-201ENSMUST00000119259 442 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm11783-201ENSMUST00000119549 885 ntBASIC9.64□□□□□ -0.87
Smn1P97801 Gm7150-201ENSMUST00000122032 981 ntBASIC9.64□□□□□ -0.87
Smn1P97801 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smn1P97801 Gm26047-201ENSMUST00000157308 113 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms