Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm11500-201ENSMUST00000118237 601 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm16219-201ENSMUST00000120096 274 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm12899-201ENSMUST00000120565 551 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm7741-201ENSMUST00000181445 989 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Gm44315-201ENSMUST00000203041 219 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.73□□□□□ -0.69
Nkx3-2P97503 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx3-2P97503 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC10.72□□□□□ -0.69
Nkx3-2P97503 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.72□□□□□ -0.69
Nkx3-2P97503 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Nkx3-2P97503 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms