Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Gm27440-201ENSMUST00000184785 107 ntBASIC14.16□□□□□ -0.14
Nkx2-3P97334 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Gm43547-201ENSMUST00000197729 328 ntBASIC14.16□□□□□ -0.14
Nkx2-3P97334 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.16□□□□□ -0.14
Nkx2-3P97334 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Mir326-201ENSMUST00000083637 95 ntBASIC14.16□□□□□ -0.14
Nkx2-3P97334 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Gm12912-201ENSMUST00000121596 1381 ntBASIC14.16□□□□□ -0.14
Nkx2-3P97334 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.16□□□□□ -0.14
Nkx2-3P97334 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nkx2-3P97334 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm27956-201ENSMUST00000175604 260 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm6677-201ENSMUST00000195100 441 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm37197-201ENSMUST00000195607 401 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm43854-201ENSMUST00000200418 394 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm33080-201ENSMUST00000205429 172 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkx2-3P97334 AC121567.1-201ENSMUST00000227213 842 ntBASIC14.15□□□□□ -0.14
Nkx2-3P97334 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx2-3P97334 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.14□□□□□ -0.15
Nkx2-3P97334 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.14□□□□□ -0.15
Nkx2-3P97334 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Gm12906-201ENSMUST00000154610 441 ntBASIC14.14□□□□□ -0.15
Nkx2-3P97334 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx2-3P97334 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.14□□□□□ -0.15
Nkx2-3P97334 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.14□□□□□ -0.15
Nkx2-3P97334 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-3P97334 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms