Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm37299-201ENSMUST00000193951 826 ntBASIC12.3□□□□□ -0.44
Trim43cP86449 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.3□□□□□ -0.44
Trim43cP86449 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43cP86449 Gm43916-201ENSMUST00000205062 967 ntBASIC12.3□□□□□ -0.44
Trim43cP86449 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim43cP86449 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim43cP86449 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.3□□□□□ -0.44
Trim43cP86449 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43cP86449 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43cP86449 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.3□□□□□ -0.44
Trim43cP86449 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43cP86449 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43cP86449 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43cP86449 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43cP86449 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim43cP86449 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim43cP86449 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim43cP86449 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim43cP86449 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim43cP86449 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim43cP86449 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim43cP86449 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Gm5468-202ENSMUST00000227851 682 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim43cP86449 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim43cP86449 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim43cP86449 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43cP86449 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim43cP86449 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.29□□□□□ -0.44
Trim43cP86449 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim43cP86449 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim43cP86449 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43cP86449 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim43cP86449 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43cP86449 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43cP86449 Gm13611-201ENSMUST00000118269 318 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 Gm43520-201ENSMUST00000197996 164 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 Gm43378-201ENSMUST00000199336 582 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim43cP86449 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim43cP86449 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trim43cP86449 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim43cP86449 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 BC043934-202ENSMUST00000185694 2356 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trim43cP86449 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.28□□□□□ -0.44
Trim43cP86449 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim43cP86449 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.27□□□□□ -0.44
Trim43cP86449 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43cP86449 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim43cP86449 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim43cP86449 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim43cP86449 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim43cP86449 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim43cP86449 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms