Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp9xP70398 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.36□□□□□ -0.91
Usp9xP70398 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9xP70398 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Usp9xP70398 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9xP70398 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9xP70398 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9xP70398 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC9.35□□□□□ -0.91
Usp9xP70398 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Usp9xP70398 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9xP70398 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Gm44540-201ENSMUST00000205640 354 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Usp9xP70398 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Gm8725-201ENSMUST00000221829 1333 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9xP70398 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9xP70398 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Usp9xP70398 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 Gm11540-201ENSMUST00000117457 780 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 Ighv5-1-201ENSMUST00000193324 353 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.35□□□□□ -0.91
Usp9xP70398 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.35□□□□□ -0.91
Usp9xP70398 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.35□□□□□ -0.91
Usp9xP70398 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Usp9xP70398 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Usp9xP70398 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9xP70398 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp9xP70398 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Usp9xP70398 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm38135-201ENSMUST00000195068 502 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC9.34□□□□□ -0.91
Usp9xP70398 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm9701-201ENSMUST00000077976 427 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Usp9xP70398 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Usp9xP70398 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.34□□□□□ -0.91
Usp9xP70398 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Gm11952-201ENSMUST00000121172 821 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Gm14176-201ENSMUST00000121302 477 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
Usp9xP70398 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC9.34□□□□□ -0.91
Usp9xP70398 Gm40332-201ENSMUST00000199847 938 ntBASIC9.34□□□□□ -0.91
Usp9xP70398 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms