Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shox2P70390 Gm6180-201ENSMUST00000065243 498 ntBASIC11.11□□□□□ -0.63
Shox2P70390 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shox2P70390 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shox2P70390 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC11.11□□□□□ -0.63
Shox2P70390 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.11□□□□□ -0.63
Shox2P70390 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Shox2P70390 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shox2P70390 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.1□□□□□ -0.63
Shox2P70390 AC117648.1-201ENSMUST00000219777 2510 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm15617-201ENSMUST00000118973 771 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.1□□□□□ -0.63
Shox2P70390 Gm22846-201ENSMUST00000157706 270 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.1□□□□□ -0.63
Shox2P70390 Gm4310-201ENSMUST00000177847 889 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.1□□□□□ -0.63
Shox2P70390 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm5950-201ENSMUST00000213337 772 ntBASIC11.1□□□□□ -0.63
Shox2P70390 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.1□□□□□ -0.63
Shox2P70390 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.1□□□□□ -0.63
Shox2P70390 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shox2P70390 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.1□□□□□ -0.63
Shox2P70390 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shox2P70390 Gm37975-201ENSMUST00000195494 2099 ntBASIC11.1□□□□□ -0.63
Shox2P70390 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shox2P70390 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shox2P70390 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shox2P70390 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shox2P70390 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.09□□□□□ -0.63
Shox2P70390 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.09□□□□□ -0.63
Shox2P70390 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.09□□□□□ -0.63
Shox2P70390 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.09□□□□□ -0.63
Shox2P70390 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.09□□□□□ -0.63
Shox2P70390 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.09□□□□□ -0.63
Shox2P70390 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.09□□□□□ -0.63
Shox2P70390 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.09□□□□□ -0.63
Shox2P70390 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.09□□□□□ -0.63
Shox2P70390 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.09□□□□□ -0.63
Shox2P70390 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Shox2P70390 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shox2P70390 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms