Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.48□□□□□ -0.41
Hmgb1P63158 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm12266-201ENSMUST00000120311 962 ntBASIC12.48□□□□□ -0.41
Hmgb1P63158 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm6722-201ENSMUST00000221586 390 ntBASIC12.48□□□□□ -0.41
Hmgb1P63158 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.48□□□□□ -0.41
Hmgb1P63158 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Hmgb1P63158 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm12247-201ENSMUST00000117585 670 ntBASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm12579-201ENSMUST00000118040 783 ntBASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm13461-201ENSMUST00000120980 662 ntBASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm17040-202ENSMUST00000170597 889 ntBASIC12.47□□□□□ -0.41
Hmgb1P63158 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Gm9353-201ENSMUST00000200472 604 ntBASIC12.47□□□□□ -0.41
Hmgb1P63158 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgb1P63158 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgb1P63158 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.46□□□□□ -0.41
Hmgb1P63158 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.46□□□□□ -0.41
Hmgb1P63158 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmgb1P63158 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgb1P63158 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms