Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm5P62322 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Gm5370-201ENSMUST00000187187 574 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Lsm5P62322 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.34□□□□□ -0.91
Lsm5P62322 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Lsm5P62322 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.34□□□□□ -0.91
Lsm5P62322 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.34□□□□□ -0.91
Lsm5P62322 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Lsm5P62322 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lsm5P62322 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.33□□□□□ -0.92
Lsm5P62322 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.33□□□□□ -0.92
Lsm5P62322 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.33□□□□□ -0.92
Lsm5P62322 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm28937-201ENSMUST00000185413 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm29400-201ENSMUST00000187208 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm28662-201ENSMUST00000188446 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm28251-201ENSMUST00000188835 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm37318-201ENSMUST00000194325 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm38017-201ENSMUST00000194768 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm37287-201ENSMUST00000195449 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm37793-201ENSMUST00000195548 695 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm4607-201ENSMUST00000206649 577 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.33□□□□□ -0.92
Lsm5P62322 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.33□□□□□ -0.92
Lsm5P62322 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm5P62322 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms