Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.2□□□□□ -0.78
Lsm3P62311 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Lsm3P62311 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Lsm3P62311 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Lsm3P62311 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Lsm3P62311 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.2□□□□□ -0.78
Lsm3P62311 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Lsm3P62311 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm12091-201ENSMUST00000146791 830 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Lsm3P62311 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC10.19□□□□□ -0.78
Lsm3P62311 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm5356-201ENSMUST00000093326 615 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.19□□□□□ -0.78
Lsm3P62311 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Lsm3P62311 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.19□□□□□ -0.78
Lsm3P62311 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Lsm3P62311 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.18□□□□□ -0.78
Lsm3P62311 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Lsm3P62311 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm3P62311 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.18□□□□□ -0.78
Lsm3P62311 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm3P62311 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Lsm3P62311 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Lsm3P62311 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.18□□□□□ -0.78
Lsm3P62311 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.18□□□□□ -0.78
Lsm3P62311 Gm14071-201ENSMUST00000117817 509 ntBASIC10.18□□□□□ -0.78
Lsm3P62311 Gm11500-201ENSMUST00000118237 601 ntBASIC10.18□□□□□ -0.78
Lsm3P62311 Gm14832-201ENSMUST00000121289 322 ntBASIC10.18□□□□□ -0.78
Lsm3P62311 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms