Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm11619-201ENSMUST00000117474 237 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC9.11□□□□□ -0.95
Lmo4P61969 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.11□□□□□ -0.95
Lmo4P61969 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm9372-201ENSMUST00000168454 430 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Gm17070-201ENSMUST00000170463 784 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Lmo4P61969 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm5621-201ENSMUST00000187303 640 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Gm34379-201ENSMUST00000195036 290 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.11□□□□□ -0.95
Lmo4P61969 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm5178-201ENSMUST00000219380 898 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm7589-201ENSMUST00000085631 534 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Lmo4P61969 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.11□□□□□ -0.95
Lmo4P61969 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.11□□□□□ -0.95
Lmo4P61969 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Rgr-203ENSMUST00000225070 4704 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Gm5641-201ENSMUST00000091130 1488 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Lmo4P61969 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm11578-201ENSMUST00000118530 459 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Gm13019-201ENSMUST00000120000 276 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.1□□□□□ -0.95
Lmo4P61969 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm42430-201ENSMUST00000197209 616 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.1□□□□□ -0.95
Lmo4P61969 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Lmo4P61969 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Lmo4P61969 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.1□□□□□ -0.95
Lmo4P61969 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.1□□□□□ -0.95
Lmo4P61969 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Lmo4P61969 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms