Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks2P56390 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks2P56390 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Cks2P56390 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks2P56390 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.41□□□□□ -0.9
Cks2P56390 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks2P56390 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks2P56390 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.4□□□□□ -0.9
Cks2P56390 Gm13665-201ENSMUST00000120830 528 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.4□□□□□ -0.9
Cks2P56390 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.4□□□□□ -0.9
Cks2P56390 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Gm8815-201ENSMUST00000173809 620 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Gm10807-201ENSMUST00000177134 795 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cks2P56390 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cks2P56390 Gm27516-201ENSMUST00000184237 98 ntBASIC9.4□□□□□ -0.9
Cks2P56390 AA914427-201ENSMUST00000193194 1166 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm9353-201ENSMUST00000200472 604 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.4□□□□□ -0.9
Cks2P56390 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm45224-201ENSMUST00000208203 414 ntBASIC9.4□□□□□ -0.9
Cks2P56390 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Gm7399-201ENSMUST00000032395 858 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Cks2P56390 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.4□□□□□ -0.9
Cks2P56390 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cks2P56390 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Cks2P56390 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cks2P56390 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Cks2P56390 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.4□□□□□ -0.91
Cks2P56390 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.4□□□□□ -0.91
Cks2P56390 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cks2P56390 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.39□□□□□ -0.91
Cks2P56390 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Cks2P56390 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cks2P56390 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cks2P56390 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms