Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sox6P40645 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Gm14028-201ENSMUST00000117434 479 ntBASIC10.63□□□□□ -0.71
Sox6P40645 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.63□□□□□ -0.71
Sox6P40645 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.63□□□□□ -0.71
Sox6P40645 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.63□□□□□ -0.71
Sox6P40645 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Sox6P40645 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.63□□□□□ -0.71
Sox6P40645 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.63□□□□□ -0.71
Sox6P40645 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.62□□□□□ -0.71
Sox6P40645 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.62□□□□□ -0.71
Sox6P40645 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sox6P40645 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sox6P40645 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm23596-201ENSMUST00000104304 132 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.62□□□□□ -0.71
Sox6P40645 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.62□□□□□ -0.71
Sox6P40645 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Gm6114-201ENSMUST00000182472 968 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Gm27341-201ENSMUST00000183570 106 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm28450-201ENSMUST00000187349 638 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Gm7003-201ENSMUST00000195089 312 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Sox6P40645 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Sox6P40645 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.62□□□□□ -0.71
Sox6P40645 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sox6P40645 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Sox6P40645 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.62□□□□□ -0.71
Sox6P40645 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sox6P40645 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Sox6P40645 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.61□□□□□ -0.71
Sox6P40645 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Sox6P40645 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.61□□□□□ -0.71
Sox6P40645 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Sox6P40645 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sox6P40645 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Sox6P40645 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sox6P40645 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms