Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Timp3P39876 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Timp3P39876 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm7150-201ENSMUST00000122032 981 ntBASIC9.32□□□□□ -0.92
Timp3P39876 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.32□□□□□ -0.92
Timp3P39876 Gm8194-201ENSMUST00000159783 859 ntBASIC9.32□□□□□ -0.92
Timp3P39876 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm9136-201ENSMUST00000193368 454 ntBASIC9.32□□□□□ -0.92
Timp3P39876 Gm37299-201ENSMUST00000193951 826 ntBASIC9.32□□□□□ -0.92
Timp3P39876 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.32□□□□□ -0.92
Timp3P39876 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm45113-201ENSMUST00000207518 165 ntBASIC9.32□□□□□ -0.92
Timp3P39876 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Timp3P39876 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.32□□□□□ -0.92
Timp3P39876 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.32□□□□□ -0.92
Timp3P39876 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.32□□□□□ -0.92
Timp3P39876 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Timp3P39876 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Timp3P39876 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Timp3P39876 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Timp3P39876 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Timp3P39876 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Timp3P39876 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Timp3P39876 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Timp3P39876 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Gm42518-201ENSMUST00000196277 938 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Timp3P39876 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Timp3P39876 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Timp3P39876 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.31□□□□□ -0.92
Timp3P39876 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.31□□□□□ -0.92
Timp3P39876 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Timp3P39876 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms