Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.41□□□□□ -0.42
Pde6bP23440 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Gm14270-201ENSMUST00000118388 846 ntBASIC12.41□□□□□ -0.42
Pde6bP23440 Gm13422-201ENSMUST00000118834 504 ntBASIC12.41□□□□□ -0.42
Pde6bP23440 Gm16219-201ENSMUST00000120096 274 ntBASIC12.41□□□□□ -0.42
Pde6bP23440 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.41□□□□□ -0.42
Pde6bP23440 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pde6bP23440 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Gm10263-201ENSMUST00000085163 300 ntBASIC12.41□□□□□ -0.42
Pde6bP23440 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.41□□□□□ -0.42
Pde6bP23440 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pde6bP23440 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pde6bP23440 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pde6bP23440 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.4□□□□□ -0.42
Pde6bP23440 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pde6bP23440 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.4□□□□□ -0.42
Pde6bP23440 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm14395-201ENSMUST00000120494 563 ntBASIC12.4□□□□□ -0.42
Pde6bP23440 Gm15549-201ENSMUST00000121595 622 ntBASIC12.4□□□□□ -0.42
Pde6bP23440 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.4□□□□□ -0.42
Pde6bP23440 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.4□□□□□ -0.42
Pde6bP23440 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Pde6bP23440 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6bP23440 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6bP23440 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6bP23440 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6bP23440 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6bP23440 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pde6bP23440 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6bP23440 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.39□□□□□ -0.43
Pde6bP23440 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6bP23440 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.39□□□□□ -0.43
Pde6bP23440 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6bP23440 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms