Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm23647-201ENSMUST00000175042 109 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Rn5s-201ENSMUST00000177555 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm22109-201ENSMUST00000177995 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm22291-201ENSMUST00000178027 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm23284-201ENSMUST00000178069 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm25018-201ENSMUST00000179081 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm25212-201ENSMUST00000179432 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm26391-201ENSMUST00000179843 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm6606-201ENSMUST00000193613 947 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm24089-201ENSMUST00000093696 109 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.52□□□□□ -0.4
Hoxc6P10629 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc6P10629 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc6P10629 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc6P10629 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc6P10629 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc6P10629 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc6P10629 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc6P10629 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Hoxc6P10629 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.52□□□□□ -0.41
Hoxc6P10629 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxc6P10629 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm19918-201ENSMUST00000194858 400 ntBASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.52□□□□□ -0.41
Hoxc6P10629 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms