Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.31□□□□□ -0.44
Chmp6P0C0A3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp6P0C0A3 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm12247-201ENSMUST00000117585 670 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm43186-201ENSMUST00000198130 824 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp6P0C0A3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp6P0C0A3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms