Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxc9P09633 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxc9P09633 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxc9P09633 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.58□□□□□ -0.08
Hoxc9P09633 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.58□□□□□ -0.08
Hoxc9P09633 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Hoxc9P09633 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.58□□□□□ -0.08
Hoxc9P09633 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc9P09633 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Matn2-203ENSMUST00000226766 3252 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm14592-201ENSMUST00000117201 560 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm16459-201ENSMUST00000121443 686 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm25604-201ENSMUST00000158359 133 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm24954-201ENSMUST00000178831 110 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm33080-201ENSMUST00000205429 172 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Hoxc9P09633 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Hoxc9P09633 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.57□□□□□ -0.08
Hoxc9P09633 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc9P09633 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Hoxc9P09633 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
Hoxc9P09633 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hoxc9P09633 Gm13204-201ENSMUST00000120110 821 ntBASIC14.56□□□□□ -0.08
Hoxc9P09633 Gm14052-201ENSMUST00000121434 1031 ntBASIC14.56□□□□□ -0.08
Hoxc9P09633 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hoxc9P09633 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxc9P09633 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.56□□□□□ -0.08
Hoxc9P09633 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.56□□□□□ -0.08
Hoxc9P09633 AC154407.1-201ENSMUST00000226777 526 ntBASIC14.56□□□□□ -0.08
Hoxc9P09633 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Gm19027-201ENSMUST00000187291 1355 ntBASIC14.56□□□□□ -0.08
Hoxc9P09633 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxc9P09633 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc9P09633 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc9P09633 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc9P09633 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Hoxc9P09633 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc9P09633 Gm15982-201ENSMUST00000121681 554 ntBASIC14.55□□□□□ -0.08
Hoxc9P09633 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxc9P09633 Platr10-202ENSMUST00000191479 818 ntBASIC14.55□□□□□ -0.08
Hoxc9P09633 Gm43564-201ENSMUST00000196185 211 ntBASIC14.55□□□□□ -0.08
Hoxc9P09633 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms