Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
P04224 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
P04224 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.91□□□□□ -0.82
P04224 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.91□□□□□ -0.82
P04224 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
P04224 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
P04224 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.91□□□□□ -0.82
P04224 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
P04224 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.91□□□□□ -0.82
P04224 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
P04224 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
P04224 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
P04224 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.91□□□□□ -0.82
P04224 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
P04224 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.91□□□□□ -0.82
P04224 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.9□□□□□ -0.82
P04224 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.9□□□□□ -0.82
P04224 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.9□□□□□ -0.82
P04224 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.9□□□□□ -0.82
P04224 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.9□□□□□ -0.82
P04224 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.9□□□□□ -0.82
P04224 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.9□□□□□ -0.82
P04224 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.9□□□□□ -0.82
P04224 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.9□□□□□ -0.82
P04224 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.9□□□□□ -0.82
P04224 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Mospd4-201ENSMUST00000180618 576 ntBASIC9.9□□□□□ -0.82
P04224 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.9□□□□□ -0.82
P04224 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.9□□□□□ -0.82
P04224 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.9□□□□□ -0.82
P04224 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.9□□□□□ -0.82
P04224 Gm43118-201ENSMUST00000199149 775 ntBASIC9.9□□□□□ -0.82
P04224 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC9.9□□□□□ -0.82
P04224 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.9□□□□□ -0.82
P04224 Lect2-202ENSMUST00000225183 823 ntBASIC9.9□□□□□ -0.82
P04224 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
P04224 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
P04224 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P04224 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P04224 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P04224 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
P04224 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
P04224 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
P04224 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
P04224 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
P04224 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.89□□□□□ -0.83
P04224 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
P04224 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.89□□□□□ -0.83
P04224 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.89□□□□□ -0.83
P04224 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms