Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm23745-201ENSMUST00000104230 125 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm19918-201ENSMUST00000194858 400 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trdmt1O55055 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.44□□□□□ -0.42
Trdmt1O55055 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdmt1O55055 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Btrc-209ENSMUST00000224478 2194 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm25569-201ENSMUST00000157175 131 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm43547-201ENSMUST00000197729 328 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Trav11n-201ENSMUST00000200113 343 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trdmt1O55055 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.43□□□□□ -0.42
Trdmt1O55055 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdmt1O55055 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms