Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm38007-201ENSMUST00000192187 313 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm33707-201ENSMUST00000195135 569 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm31274-201ENSMUST00000197356 229 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm18010-201ENSMUST00000203553 202 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm44814-201ENSMUST00000207018 434 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 AC121567.1-201ENSMUST00000227213 842 ntBASIC13.65□□□□□ -0.22
NpcdF8VQB8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NpcdF8VQB8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
NpcdF8VQB8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm25872-201ENSMUST00000177784 100 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm21778-201ENSMUST00000178779 471 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm26957-201ENSMUST00000182645 977 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm17936-201ENSMUST00000199413 988 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm5178-201ENSMUST00000219380 898 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Gm25007-201ENSMUST00000083808 133 ntBASIC13.64□□□□□ -0.23
NpcdF8VQB8 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NpcdF8VQB8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm8226-201ENSMUST00000190511 798 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm44323-201ENSMUST00000198689 129 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.63□□□□□ -0.23
NpcdF8VQB8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NpcdF8VQB8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms