Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm9062-201ENSMUST00000117712 727 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm11956-201ENSMUST00000119525 512 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm23699-201ENSMUST00000158835 135 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm19353-201ENSMUST00000184561 445 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Spcs1-203ENSMUST00000226374 592 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
H2afb2S4R1M3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm13045-201ENSMUST00000119019 712 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm37284-201ENSMUST00000193607 539 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm43186-201ENSMUST00000198130 824 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Mir7686-201ENSMUST00000200604 57 ntBASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb2S4R1M3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms