Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm44262-201ENSMUST00000204969 372 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm6082-201ENSMUST00000215204 454 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2afb3S4R1G7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm17376-201ENSMUST00000166016 84 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm6439-201ENSMUST00000199849 862 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm45113-201ENSMUST00000207518 165 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Gm4978-201ENSMUST00000071565 801 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Olfr582-201ENSMUST00000098212 960 ntBASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H2afb3S4R1G7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm13350-201ENSMUST00000120519 479 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm24749-201ENSMUST00000157838 343 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms