Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gm16518-201ENSMUST00000117960 508 ntBASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gm13827-201ENSMUST00000148801 372 ntBASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gm17944-201ENSMUST00000186351 643 ntBASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.23□□□□□ -0.29
Scn11aQ9R053 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.23□□□□□ -0.29
Scn11aQ9R053 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm26174-201ENSMUST00000158415 219 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 Mir8091-201ENSMUST00000183602 139 ntBASIC13.22□□□□□ -0.29
Scn11aQ9R053 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn11aQ9R053 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.21□□□□□ -0.29
Scn11aQ9R053 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm12345-201ENSMUST00000119288 898 ntBASIC13.21□□□□□ -0.29
Scn11aQ9R053 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm37207-201ENSMUST00000194284 296 ntBASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm2474-201ENSMUST00000195162 559 ntBASIC13.21□□□□□ -0.29
Scn11aQ9R053 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn11aQ9R053 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms