Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm22902-201ENSMUST00000158488 302 ntBASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Mir7076-201ENSMUST00000183519 74 ntBASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Upk3aQ9JKX8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm9133-201ENSMUST00000118289 540 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm14460-201ENSMUST00000121511 639 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm44329-201ENSMUST00000197469 112 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms