Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.9□□□□□ -0.35
Trim11Q99PQ2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Trim11Q99PQ2 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.9□□□□□ -0.35
Trim11Q99PQ2 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm7857-201ENSMUST00000117957 358 ntBASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm15329-201ENSMUST00000121408 155 ntBASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm15549-201ENSMUST00000121595 622 ntBASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm7741-201ENSMUST00000181445 989 ntBASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm9257-201ENSMUST00000221254 232 ntBASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim11Q99PQ2 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm14193-201ENSMUST00000105067 153 ntBASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.88□□□□□ -0.35
Trim11Q99PQ2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Thoc7-209ENSMUST00000225325 765 ntBASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim11Q99PQ2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms