Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Gm18734-201ENSMUST00000172937 808 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Gm8100-201ENSMUST00000182906 988 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Gm6108-201ENSMUST00000208365 367 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Gm9899-201ENSMUST00000065519 555 ntBASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdk5rap3Q99LM2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Gm25881-201ENSMUST00000157783 103 ntBASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdk5rap3Q99LM2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdk5rap3Q99LM2 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk5rap3Q99LM2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk5rap3Q99LM2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdk5rap3Q99LM2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms