Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm24992-201ENSMUST00000157412 130 ntBASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Mir6546-201ENSMUST00000184460 62 ntBASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Gm37466-201ENSMUST00000195692 652 ntBASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb6Q91XZ4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm11949-201ENSMUST00000117640 372 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm8302-201ENSMUST00000119217 852 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm10051-201ENSMUST00000145209 414 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm44315-201ENSMUST00000203041 219 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm45398-201ENSMUST00000210561 165 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm23105-201ENSMUST00000083719 134 ntBASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb6Q91XZ4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms