Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.49□□□□□ -0.89
H1fooQ8VIK3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
H1fooQ8VIK3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm12247-201ENSMUST00000117585 670 ntBASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm24990-201ENSMUST00000157406 323 ntBASIC9.48□□□□□ -0.89
H1fooQ8VIK3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Gm37444-201ENSMUST00000193605 439 ntBASIC9.48□□□□□ -0.89
H1fooQ8VIK3 AU022133-201ENSMUST00000200601 873 ntBASIC9.48□□□□□ -0.89
H1fooQ8VIK3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.48□□□□□ -0.89
H1fooQ8VIK3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
H1fooQ8VIK3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm7851-201ENSMUST00000117574 323 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm11450-201ENSMUST00000121144 333 ntBASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.47□□□□□ -0.89
H1fooQ8VIK3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms